CAZyme Information: PITG_03135-t26_1-p1

Basic Information

• Species: Phytophthora infestans
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
• CAZyme ID: PITG_03135-t26_1-p1
• CAZy Family: AA7
• CAZyme Description: lysosomal beta glucosidase, putative

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
732	DS028121|CGC3	79670.83	4.4048

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PinfestansT30-4	19344	403677	1547	17797

• Gene Location: location=DS028121:645091-647458(-)

Full Sequence      

MLSKWLLAQEIVDSFSTDQVIGQMCQLEIKMILNDDNSVNETLVRQYAKLGVGSYLNSPF
AGWNATAWRNAITEIQTFHMDENGGHPMVFGLDSVHGAQYVDQAVMFPHQINAGASFNPK
WARKMGYITGRDTAAAGVSWILGPILDISYNPLWTRSYETFGEDPYLASVLGAAYIQGVQ
DNSQNGACMKHFIGYSQTATGVDRESVTISDYDLLNYHVPSFKAGIEHGAMSTMESYAAI
NGVPVVSSTKMMNTLLRDDLKFDGVVVTDWGEVNNLQSWHRVVRTQQDAVELVIADTSLD
MSMVPSSIDFIDQAKNALSNNPDYEERLRSSAKRIIKMKLKMGLYDTPVPGEDNVALVGN
DDDLEQALNLARESVVLLKNNDNLLPLSNGTSCGGWSIYWQGASGNDNFPHGIADETYSD
DDLSRATGHAEEADVVVVAIGEAPYAEKWGDVDELTLPSGQLEYVQALANTGTKVVLILF
EDRPRLLGSLPDSVGAAVWGGLPCEQGGQAVAELLFGEVNPSGRLPITYPKHSGHIMIPY
HHRVDTQCSYGACEMQWDFGAGLSYTSFSYSALELSTDKITSMGDKITVSVKVTNNGTMA
GKDTVMLFMIQLYRAISVPEVKMLRKFEKIELAAGASTTVTFVLTVDDWGVYKPQIGSGF
NRVAENGEFVVAVGPDTDCDVYNDAGITNKLCANFTLAATSTTAGDGTGSLASHSLMPWW
ATVLIVLVSLLL

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	83	295	8.9e-63	0.9398148148148148

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	1.95e-93	87	677	105	754	beta-glucosidase BglX.
224389	BglX	2.07e-62	16	388	2	351	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629	PLN03080	2.22e-49	101	644	108	742	Probable beta-xylosidase; Provisional
395747	Glyco_hydro_3	3.62e-49	16	336	1	314	Glycosyl hydrolase family 3 N terminal domain.
396478	Glyco_hydro_3_C	1.46e-37	375	565	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	2.57e-268	8	697	30	762
CCA27737.1|GH3	7.02e-254	11	697	71	808
UIZ27116.1|GH3	5.74e-247	24	697	1	724
UIZ29613.1|GH3	1.47e-246	8	704	74	826
UIZ29432.1|GH3	1.21e-236	8	704	29	770

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	8.04e-114	9	680	18	749	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
4ZOA_A	3.21e-72	9	682	7	715	Crystal Structure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOA_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOB_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOB_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOD_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOD_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOE_A Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262],4ZOE_B Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262]
4ZO6_A	4.29e-71	9	682	7	715	Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose [Listeria innocua Clip11262],4ZO6_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose [Listeria innocua Clip11262],4ZO7_A Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose [Listeria innocua Clip11262],4ZO7_B Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose [Listeria innocua Clip11262],4ZO8_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorose [Listeria innocua Clip11262],4ZO8_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorose [Listeria innocua Clip11262],4ZO9_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with laminaribiose [Listeria innocua Clip11262],4ZO9_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with laminaribiose [Listeria innocua Clip11262],4ZOC_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorotriose [Listeria innocua Clip11262],4ZOC_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorotriose [Listeria innocua Clip11262]
7EAP_A	1.06e-70	10	678	20	746	Chain A, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5YOT_A	1.06e-70	10	678	20	746	Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	8.17e-139	11	674	83	812	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	5.83e-113	9	680	40	771	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|T2KMH0|PLH24_FORAG	7.67e-73	81	690	60	723	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
sp|P33363|BGLX_ECOLI	1.36e-68	10	677	40	754	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|Q56078|BGLX_SALTY	1.29e-67	10	677	40	754	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000044	0.000000

TMHMM  Annotations     

There is no transmembrane helices in PITG_03135-t26_1-p1.