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CAZyme Information: PITG_02961-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora infestans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans | |||||||||||
| CAZyme ID | PITG_02961-t26_1-p1 | |||||||||||
| CAZy Family | AA7 | |||||||||||
| CAZyme Description | choline dehydrogenase, putative | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 32 | 566 | 3.3e-164 | 0.9947183098591549 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 235000 | PRK02106 | 0.0 | 29 | 588 | 2 | 555 | choline dehydrogenase; Validated |
| 225186 | BetA | 4.53e-179 | 26 | 572 | 1 | 542 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 366272 | GMC_oxred_N | 3.46e-55 | 105 | 329 | 15 | 216 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 398739 | GMC_oxred_C | 1.03e-41 | 428 | 560 | 5 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 215420 | PLN02785 | 3.17e-32 | 19 | 565 | 42 | 577 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.83e-258 | 1 | 588 | 1 | 581 | |
| 6.57e-204 | 14 | 587 | 12 | 578 | |
| 8.80e-198 | 11 | 587 | 52 | 624 | |
| 1.79e-197 | 18 | 582 | 5 | 568 | |
| 1.79e-161 | 35 | 570 | 35 | 574 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.26e-93 | 26 | 570 | 1 | 566 | Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 1.25e-91 | 31 | 570 | 6 | 566 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 2.46e-91 | 31 | 570 | 6 | 566 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 2.46e-91 | 31 | 570 | 6 | 566 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 3.71e-91 | 31 | 570 | 22 | 582 | Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.79e-205 | 22 | 587 | 32 | 596 | Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1 |
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| 1.19e-204 | 32 | 587 | 45 | 599 | Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1 |
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| 9.93e-200 | 27 | 587 | 35 | 594 | Choline dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=CHDH PE=1 SV=2 |
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| 2.32e-167 | 30 | 578 | 2 | 547 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) OX=399739 GN=betA PE=3 SV=1 |
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| 4.21e-167 | 32 | 588 | 2 | 555 | Oxygen-dependent choline dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) OX=439855 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000044 | 0.000005 |