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CAZyme Information: PITG_02335-t26_1-p1

You are here: Home > Sequence: PITG_02335-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_02335-t26_1-p1
CAZy Family AA3
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
509 54435.26 4.5908
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_02335-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH17 136 380 6.2e-17 0.909967845659164

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227625 Scw11 1.12e-13 58 376 1 304
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
366033 Glyco_hydro_17 5.29e-09 152 380 53 304
Glycosyl hydrolases family 17.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.84e-72 104 381 28 309
8.55e-60 104 373 97 367
8.91e-60 92 384 16 315
2.49e-56 125 384 45 326
3.85e-56 167 396 16 247

PDB Hits      help

PITG_02335-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PITG_02335-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999945 0.000100

TMHMM  Annotations      help

There is no transmembrane helices in PITG_02335-t26_1-p1.