CAZyme Information: PHYSODRAFT_557002-t26_1-p1

Basic Information

• Species: Phytophthora sojae
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
• CAZyme ID: PHYSODRAFT_557002-t26_1-p1
• CAZy Family: PL3
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
785		82217.18	8.3769

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PsojaeP6497	28142	1094619	1653	26489

• Gene Location: location=JH159153:103403-105760(-)

Full Sequence      

MRLPRFNCWAGALLALSAASFGANAQLYDAIVVGSGPGGLVAAEYLSRDSSVSVLILEAG
PKSLAATGGTDSPNYAQGRGLTKFDIPGEYDGTTYNSANEQYRVDWISDAYMWLGKLVGG
CSSINAALYFRPPDSYVTNMQWPFSAAQMVAKMDENEKLHGHTDKPSPNGVWYTQEGYSI
VSKALLARGYAERILNDAAARNSKSKTFGHAPFTFKNGKRDTPANAFWAPMSTRSNVKML
TGAKVDYILRAAGGKATGVVYNGGTQATLSARGAVIMAAGALSTPKVLIQSGIGPSSQLS
MLNGRNGFAGVSQAAGWVVNANVGRNLFDTNVVFASFAHSQMSSFQYKSKPSWAIDQYMN
QGFTGPFSSSGPTLISYENYDVQGRMYEFQSTALTTGFGEFASRTNAFTLALYVNNPESR
TASGFDANGNWKAFNEGWPYFRTNRDLAAMQSYAQRTVSAMVAQGATFLSAGSDDASVAN
WVAANRGYITHHFGGSCFASKNAADSTRCADEKLRVIGMNNVFVADASAMRDGTVNPYGF
IMYIGREAADQVKSYIAANNGGSGATCSSAENNVNYQGNDVGSQQSASASGCCSICAANS
NCKAYTWTNYNGGTCWLKSAKGGAVSQSGAVSATLGGSATSSCSTVEENTNYGGADIGNA
LSGSAEGCCAICKGRTGCNAYTWTNYNSGTCWLKSSKGTATAQTGARSAQISSSSSTCTL
VNNVDYANNDIGSAPSSTASGCCAICRAKTGCKVFTWTNYNGGTCWLKSAQGATSTSAGA
VSGSI

Enzyme Prediction     

EC	1.1.99.18:3

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	22	552	8.4e-110	0.9726277372262774

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225186	BetA	2.86e-36	28	558	8	539	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000	PRK02106	5.21e-21	28	350	6	309	choline dehydrogenase; Validated
366272	GMC_oxred_N	2.86e-16	110	329	19	215	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
238533	APPLE_Factor_XI_like	2.15e-12	641	709	3	70	Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
238533	APPLE_Factor_XI_like	3.30e-12	719	784	7	71	Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ20744.1|AA3_1	1.40e-266	9	635	9	637
AIG55859.1|AA3_1	6.71e-217	28	785	24	811
AIG55821.1|AA3_1	2.56e-195	7	782	3	807
AIG55589.1|AA3_1	3.34e-148	13	534	7	526
AIG55820.1|AA3_1	4.16e-141	7	556	3	553

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1KDG_A	5.91e-45	24	552	4	539	Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
1NAA_A	1.01e-44	28	552	3	534	Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
4QI4_A	1.36e-34	28	552	8	542	Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
4QI6_A	4.91e-34	28	552	230	764	Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
4QI7_A	3.04e-30	28	552	230	763	Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q01738|CDH_PHACH	3.78e-43	24	552	231	766	Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
sp|Q988C9|4PADH_RHILO	1.17e-19	24	554	3	535	4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1
sp|Q8D3K2|BETA_VIBVU	9.40e-15	26	528	3	505	Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1
sp|A6X2G7|BETA_BRUA4	1.21e-14	29	552	4	525	Oxygen-dependent choline dehydrogenase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=betA PE=3 SV=1
sp|A5VPA6|BETA_BRUO2	1.59e-14	29	552	4	525	Oxygen-dependent choline dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) OX=444178 GN=betA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000576	0.999376	CS pos: 25-26. Pr: 0.9586

TMHMM  Annotations     

There is no transmembrane helices in PHYSODRAFT_557002-t26_1-p1.