CAZyme Information: PHYSODRAFT_551977-t26_1-p1

Basic Information

• Species: Phytophthora sojae
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
• CAZyme ID: PHYSODRAFT_551977-t26_1-p1
• CAZy Family: PL1
• CAZyme Description: family 3 putative glycosyl hydrolase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
756		81995.42	4.9384

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PsojaeP6497	28142	1094619	1653	26489

• Gene Location: location=JH159151:5819993-5822263(+)

Full Sequence      

MDGDERDPKKALRREVVARYARAGVGSILNSPFAGGPVGGRTGWSASEWRSVIQQIHQIY
KEEGATVPMLYGVDTIHGATYVQGATLFGQPISAAASFNPELVYRMGAVAAKDTLSAGIP
WIFSPVLGIAVQPKWSRVYETFGEDPLVSSVMGAALIKGLQSSGKVAACMKHFIGYSNVR
EGLDRADNVISDWELVNYYAPPFLAAVQAGVRTAMESYVSVNGVPVIASKKLLVDLLRHD
MNFTGLLVSDYSEVDRMYSEHHLVPSVADAVRVTLQKTSLDMNMSPDLQAFGDTIESLVA
QGLITESRLDDSVRRILETKRDLGLLDSNYYEDFSQDDTDADEDVGSSADQQDALKLAQE
SVILLENRNGALPIDLDKTTSVFVTGPASDNKGFQCGGWSVFWQGSGDSTLFPNGATFKE
AVHGHAQVEHLEVVDIDGNVNPQDFQRGMQLAAKSDYTLVVLGERNYAEKTGDLLGSMAL
PAGQLWYLEELTRLNSTKVIVVLISGRPRLLEGAHDHADAVILSMLPCEQGGQALADVIF
GEVNPSARLPITYPARGTQLLPYFHRVNTRCQPYDECPVQWEFGHGLSYSKFEYSALRLN
ATQVHATSGALEVIVTVTNLGSRPGKEVVLLFVAQKFRRASVPETKLLKAFKKLETLASG
ASQDVTFVLTPEHWSYYEPHVVGSGFQRRAEPGEFVVSLLPSSTDSSTQPRAIPSPDDAE
RSSQTKTRGAPGGIASDSEAPGPATAPPSVSFYVVP

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	63	271	2.2e-61	0.9166666666666666

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	1.41e-100	8	697	64	748	beta-glucosidase BglX.
224389	BglX	5.29e-71	15	423	20	392	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629	PLN03080	1.03e-56	82	675	108	749	Probable beta-xylosidase; Provisional
395747	Glyco_hydro_3	1.09e-56	11	318	18	315	Glycosyl hydrolase family 3 N terminal domain.
396478	Glyco_hydro_3_C	3.53e-36	362	589	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ27116.1|GH3	6.17e-205	8	701	12	701
UIZ29009.1|GH3	7.17e-200	1	701	55	742
UIZ29432.1|GH3	2.22e-182	12	699	61	739
UIZ29613.1|GH3	3.87e-180	12	699	106	795
CCA27737.1|GH3	6.93e-180	7	701	94	785

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	2.95e-99	10	697	56	737	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
6R5I_A	4.50e-79	8	697	33	716	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	2.31e-78	8	697	33	716	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	2.35e-78	8	697	34	717	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A	4.23e-78	8	697	65	748	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	6.24e-120	12	699	112	811	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	2.07e-98	10	697	78	759	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|P33363|BGLX_ECOLI	1.08e-75	7	699	63	750	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|Q56078|BGLX_SALTY	2.07e-75	50	699	87	750	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|T2KMH0|PLH24_FORAG	1.21e-72	69	703	68	710	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000070	0.000000

TMHMM  Annotations     

There is no transmembrane helices in PHYSODRAFT_551977-t26_1-p1.