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CAZyme Information: PHYSODRAFT_543825-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_543825-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_543825-t26_1-p1
CAZy Family GT71
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
443 49196.21 6.1748
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH17 47 300 1.1e-24 0.9421221864951769
CBM13 315 439 8.3e-17 0.675531914893617

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227625 Scw11 2.71e-44 42 297 54 305
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
395527 Ricin_B_lectin 2.51e-21 315 435 4 126
Ricin-type beta-trefoil lectin domain.
238092 RICIN 7.71e-13 328 435 20 122
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
366033 Glyco_hydro_17 9.69e-12 29 300 2 304
Glycosyl hydrolases family 17.
214672 RICIN 2.17e-11 360 435 3 74
Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.37e-289 1 443 1 443
1.37e-289 1 443 1 443
1.37e-289 1 443 1 443
1.37e-289 1 443 1 443
1.37e-289 1 443 1 443

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.92e-31 37 308 39 294
Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432]
2.03e-30 37 308 39 294
Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose [Rhizomucor miehei CAU432],4WTS_A Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose [Rhizomucor miehei CAU432]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.85e-26 42 302 33 298
Glucan 1,3-beta-glucosidase ARB_02797 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02797 PE=1 SV=1
4.42e-24 43 300 31 300
Glucan 1,3-beta-glucosidase BGL2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=BGL2 PE=1 SV=2
6.63e-24 23 300 380 674
Probable glucan endo-1,3-beta-glucosidase btgC OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=btgC PE=3 SV=1
6.63e-24 23 300 380 674
Probable glucan endo-1,3-beta-glucosidase btgC OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=btgC PE=3 SV=1
3.99e-23 43 300 31 300
Glucan 1,3-beta-glucosidase OS=Candida albicans OX=5476 GN=BGL2 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000237 0.999705 CS pos: 22-23. Pr: 0.9758

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_543825-t26_1-p1.