CAZyme Information: PHYSODRAFT_541069-t26_1-p1

Basic Information

• Species: Phytophthora sojae
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
• CAZyme ID: PHYSODRAFT_541069-t26_1-p1
• CAZy Family: GT71
• CAZyme Description: putative glycoside hydrolase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
782		85822.53	4.3212

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PsojaeP6497	28142	1094619	1653	26489

• Gene Location: location=JH159152:1722481-1724949(-)

Full Sequence      

MLKSWMSAVCYTALSFAVLNSGVASADEWDARVDEIMATFTNTDLAGQMTQIPAYGLVNS
TYQLDEDKLRGYAKYHVGSYLSPPMSAYGEIDGRWGWTTAEMRDFVGRIQEIAMELNGGH
PMIYGTDAAHGNALMIDTVYFGQQINAAATFNPDLVYEQGRITARDTLASGISWIFDPVL
DNMHNPLWPRVYETFGEDPYLTSVMGAAIVRGMQSYNESAACMKHWIGYGWTPTGHDKDG
VTMSDFDMMNSYFPPYKAAVDAGLLTGMENYISVNGVPMVESNKYLKKLLRDDLKFEGLM
VTDYAEINHVPDFHKTARNINEAVKFSLERTSIDMSMVPADIMSFFNETLALLEEDPEIV
DRIKESVRRIIKTKLKLGLYDNPLPGEEYLSMVGNDDDVAAALASARESIVLLQNNDSSL
PLPKDASVFLTGHSAHNVGYQCGGWTQQGTGMSGNDMFAHGVSVKDGLENVVGNGSFTYF
NGLNVNGDYTEADLATAKEYASKADYTIAVIGEHSYEEKTGDIDDLTLPLGQIEYVNALA
ATGTKVILVLFEGRPRILNDLPENVYAVINGMLACEQGGQAVAEIIYGETNPSGRMPITY
PKYTGNVMIPYRHRVSTQCASGDYCVPQWDFGHGLSYTNFTYSDMRISTTNVTSSSYSVN
VSVTVTNSGSVAGKETVMLFLTQPYRSISVPEVKQLKKFSKISLDAGASQTVEFELTAAD
WSVYYPQIGEGLKLVAEDADYVIAIKPETDCDVYNETAAANPLCATFTLATGEYPFGSLV
AE

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	119	322	6.6e-56	0.8935185185185185

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	7.02e-109	109	745	92	750	beta-glucosidase BglX.
224389	BglX	5.06e-70	41	470	2	393	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747	Glyco_hydro_3	1.09e-51	73	371	28	314	Glycosyl hydrolase family 3 N terminal domain.
396478	Glyco_hydro_3_C	7.05e-43	410	637	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
178629	PLN03080	2.04e-41	141	714	114	740	Probable beta-xylosidase; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	1.13e-307	1	769	1	762
UIZ29613.1|GH3	2.40e-279	1	775	46	825
UIZ29432.1|GH3	2.98e-276	1	775	1	769
UIZ27116.1|GH3	3.11e-262	49	769	1	724
CCA27737.1|GH3	4.07e-261	31	769	66	808

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	4.68e-117	30	720	14	718	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
6R5I_A	2.11e-82	121	745	73	718	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	1.09e-81	121	745	73	718	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	1.11e-81	121	745	74	719	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A	2.05e-81	121	745	105	750	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	5.74e-127	30	745	77	811	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	3.42e-116	30	720	36	740	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|P33363|BGLX_ECOLI	1.46e-80	84	716	64	725	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|Q56078|BGLX_SALTY	5.39e-80	121	716	105	725	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|T2KMH0|PLH24_FORAG	3.22e-79	113	752	59	713	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000291	0.999696	CS pos: 26-27. Pr: 0.9720

TMHMM  Annotations     

There is no transmembrane helices in PHYSODRAFT_541069-t26_1-p1.