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CAZyme Information: PHYSODRAFT_529542-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_529542-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_529542-t26_1-p1
CAZy Family GT71
CAZyme Description xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
751 JH159162|CGC2 82263.29 5.8960
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37:92 3.2.1.55:39 3.2.1.21:1 3.2.1.6:1 3.2.1.73:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 67 317 1.4e-68 0.9814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 0.0 24 727 32 779
Probable beta-xylosidase; Provisional
185053 PRK15098 5.94e-97 102 726 118 760
beta-glucosidase BglX.
224389 BglX 5.91e-59 101 442 80 383
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
396478 Glyco_hydro_3_C 8.08e-58 388 621 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
395747 Glyco_hydro_3 2.37e-35 98 343 82 310
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.56e-213 3 727 7 775
8.51e-208 9 725 16 773
1.16e-205 1 716 13 766
1.16e-205 1 716 13 766
1.16e-205 1 716 13 766

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.10e-158 24 718 5 719
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
3.10e-158 24 718 5 719
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
1.81e-146 24 737 32 761
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
1.86e-146 24 737 32 761
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
3.16e-142 24 736 32 758
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.99e-198 7 716 9 756
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
1.48e-195 4 727 13 760
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
1.39e-194 15 725 30 771
Beta-D-xylosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BXL3 PE=1 SV=1
2.86e-194 7 725 24 772
Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1
2.01e-193 24 726 32 791
Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana OX=3702 GN=BXL6 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000282 0.999693 CS pos: 20-21. Pr: 0.5895

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_529542-t26_1-p1.