logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHYSODRAFT_525949-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_525949-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_525949-t26_1-p1
CAZy Family GT62
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
276 28748.71 4.4647
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_525949-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 27 195 4.5e-21 0.9880239520958084

CDD Domains      help

PHYSODRAFT_525949-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.35e-12 24 202 15 190
8.96e-10 25 202 18 195
4.39e-09 17 202 7 189
5.10e-09 13 202 4 194
1.73e-08 26 204 19 195

PDB Hits      help

PHYSODRAFT_525949-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PHYSODRAFT_525949-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000487 0.999491 CS pos: 26-27. Pr: 0.9692

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_525949-t26_1-p1.