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CAZyme Information: PHYSODRAFT_520974-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_520974-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_520974-t26_1-p1
CAZy Family GT57
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
214 JH159158|CGC21 23841.44 6.9469
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 29 190 3.1e-48 0.5659722222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178051 PLN02432 2.49e-33 30 196 115 282
putative pectinesterase
178113 PLN02497 2.79e-30 29 192 141 309
probable pectinesterase
395871 Pectinesterase 3.32e-29 30 187 109 276
Pectinesterase.
215357 PLN02665 2.46e-28 40 190 191 341
pectinesterase family protein
178372 PLN02773 2.25e-27 23 189 120 282
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.79e-92 30 214 160 346
1.63e-89 30 214 164 348
5.88e-85 1 214 129 338
4.16e-84 30 214 160 344
1.89e-83 30 213 160 343

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.62e-34 23 213 113 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.62e-34 23 213 113 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
4.92e-21 45 187 127 279
Chain A, Pectinesterase 1 [Solanum lycopersicum]
6.30e-18 23 187 108 283
Pectin methylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.21e-45 22 213 133 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
4.08e-43 22 214 132 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
3.15e-36 23 205 138 318
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
3.15e-36 23 205 138 318
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
2.41e-35 23 205 138 318
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999687 0.000355

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_520974-t26_1-p1.