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CAZyme Information: PHYSODRAFT_518641-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_518641-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_518641-t26_1-p1
CAZy Family GT48
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
342 JH159158|CGC9 36909.47 6.8384
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 45 317 2.9e-71 0.9166666666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178113 PLN02497 2.96e-45 38 320 35 309
probable pectinesterase
395871 Pectinesterase 4.43e-45 40 315 1 276
Pectinesterase.
178372 PLN02773 1.13e-42 46 317 14 282
pectinesterase
215117 PLN02176 4.62e-42 38 313 42 309
putative pectinesterase
215173 PLN02304 7.62e-41 49 318 87 355
probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.19e-188 1 342 1 338
1.63e-176 1 342 1 338
5.03e-156 1 342 1 344
8.28e-155 1 342 1 344
4.41e-150 9 342 6 346

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.43e-52 27 341 1 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.83e-52 27 341 1 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.63e-34 34 315 5 283
Pectin methylesterase from Carrot [Daucus carota]
5.09e-32 47 315 13 279
Chain A, Pectinesterase 1 [Solanum lycopersicum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.28e-75 29 341 20 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.12e-72 29 342 20 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
1.64e-57 29 341 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
1.64e-57 29 341 28 324
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1
1.64e-57 29 341 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000462 0.999527 CS pos: 19-20. Pr: 0.9664

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_518641-t26_1-p1.