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CAZyme Information: PHYSODRAFT_499978-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_499978-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_499978-t26_1-p1
CAZy Family GT1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
174 19559.95 7.1992
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_499978-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 19 165 6.8e-44 0.6204081632653061

CDD Domains      help

PHYSODRAFT_499978-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.17e-133 1 174 1 174
1.20e-107 37 174 35 172
8.41e-95 1 165 1 165
1.68e-94 19 165 2 148
5.24e-94 4 165 4 165

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.06e-21 31 171 20 155
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_499978-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000397 0.999579 CS pos: 27-28. Pr: 0.9669

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_499978-t26_1-p1.