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CAZyme Information: PHYSODRAFT_490617-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora sojae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae | |||||||||||
| CAZyme ID | PHYSODRAFT_490617-t26_1-p1 | |||||||||||
| CAZy Family | GH72 | |||||||||||
| CAZyme Description | pectate lyase/amb allergen | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 116 | 307 | 4.8e-80 | 0.9893048128342246 |
| PL1 | 547 | 737 | 3.1e-78 | 0.983957219251337 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 8.15e-39 | 116 | 310 | 1 | 190 | Amb_all domain. |
| 214765 | Amb_all | 1.49e-34 | 546 | 740 | 1 | 190 | Amb_all domain. |
| 226384 | PelB | 4.67e-17 | 121 | 327 | 91 | 287 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 1.36e-14 | 112 | 306 | 15 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| 226384 | PelB | 5.90e-14 | 544 | 757 | 84 | 287 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.31e-239 | 446 | 899 | 187 | 626 | |
| 2.19e-187 | 448 | 863 | 22 | 426 | |
| 6.53e-179 | 448 | 766 | 28 | 346 | |
| 7.94e-119 | 454 | 718 | 23 | 296 | |
| 7.90e-118 | 23 | 391 | 24 | 398 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.25e-84 | 22 | 362 | 3 | 335 | Pectin Lyase B [Aspergillus niger] |
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| 1.27e-83 | 22 | 353 | 3 | 325 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 3.50e-82 | 22 | 353 | 3 | 325 | Pectin Lyase A [Aspergillus niger] |
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| 7.34e-10 | 75 | 321 | 21 | 293 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.24e-97 | 449 | 828 | 20 | 391 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
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| 1.91e-90 | 9 | 349 | 9 | 341 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 2.25e-90 | 8 | 410 | 10 | 402 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 6.13e-90 | 8 | 409 | 10 | 393 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
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| 3.73e-89 | 22 | 350 | 21 | 341 | Probable pectin lyase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=pelA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000715 | 0.999268 | CS pos: 18-19. Pr: 0.9727 |