CAZyme Information: PHYSODRAFT_490245-t26_1-p1

Basic Information

• Species: Phytophthora sojae
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
• CAZyme ID: PHYSODRAFT_490245-t26_1-p1
• CAZy Family: GH72
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
343		36707.46	9.3884

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PsojaeP6497	28142	1094619	1653	26489

• Gene Location: location=JH159153:3641997-3643028(-)

Full Sequence      

MQIFAPLVALIALASGVLADGACSGPNARTTPPNGAIVVDATGSYKGSYKTVSEGVAKLN
PKKKSVQTVFVRPGVYNEQVLISPLRGPLVLQGYTCDAKNYASNQVTITQAKAQKDIPAS
VKGESRNDMTSTIRFKSDKVKVYNLNIANTAGDVGQALAVNVNATDYGFYACNLTGYQDT
VLADKGKELYAKTYINGATDFVFGRYAQAWFESCDIETIGTGFITASGRGAANSSATYVF
NRARVFGKSGVNSTVLGRPWRPYAKVIWQNSELGDVVKPQGWATWDATSSTADIVFKEFN
NSGPGAVKGSRVAFSGQLDKPVAITEVLGLNYAKEWFVDTSYL

Enzyme Prediction     

EC	3.1.1.11:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CE8	38	320	1.1e-68	0.9409722222222222

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
178051	PLN02432	4.98e-45	36	318	10	272	putative pectinesterase
395871	Pectinesterase	1.07e-39	37	316	2	276	Pectinesterase.
178372	PLN02773	8.74e-39	32	318	2	282	pectinesterase
178113	PLN02497	3.22e-38	37	332	34	319	probable pectinesterase
215117	PLN02176	1.88e-36	10	339	20	328	putative pectinesterase

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ACO54868.1|CE8	9.35e-203	1	343	1	343
ACO54869.1|CE8	2.23e-153	1	343	1	338
ABQ63096.1|CE8	2.69e-151	1	343	1	344
ACO54873.1|CE8	7.69e-151	1	343	1	344
AFM08806.1|CE8	1.88e-147	1	343	1	338

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5C1C_A	2.20e-55	29	342	3	299	Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
5C1E_A	3.10e-55	29	342	3	299	Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1GQ8_A	3.92e-31	30	316	4	283	Pectin methylesterase from Carrot [Daucus carota]
1XG2_A	1.01e-29	34	316	4	279	Chain A, Pectinesterase 1 [Solanum lycopersicum]
4PMH_A	3.48e-10	49	306	48	366	The structure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P17872|PME_ASPNG	8.15e-76	29	343	20	330	Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
sp|Q12535|PME_ASPAC	8.15e-76	13	342	6	330	Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
sp|A1DBT4|PMEA_NEOFI	2.03e-62	29	342	28	324	Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
sp|B8NPS7|PMEA_ASPFN	2.49e-60	11	342	8	324	Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1
sp|Q4WBT5|PMEA_ASPFU	5.47e-59	29	342	28	324	Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000213	0.999735	CS pos: 19-20. Pr: 0.9795

TMHMM  Annotations     

There is no transmembrane helices in PHYSODRAFT_490245-t26_1-p1.