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CAZyme Information: PHYSODRAFT_489646-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_489646-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_489646-t26_1-p1
CAZy Family GH72
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
387 41109.78 9.4469
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.10:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 110 299 5.6e-79 0.983957219251337

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 1.69e-22 108 302 2 190
Amb_all domain.
226384 PelB 3.66e-08 83 304 51 279
Pectate lyase [Carbohydrate transport and metabolism].
366158 Pec_lyase_C 4.46e-08 117 298 26 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.76e-234 2 385 16 399
4.56e-233 2 385 16 399
6.47e-233 2 385 16 399
1.16e-222 8 384 56 432
6.68e-222 8 384 56 432

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.32e-74 11 366 5 343
Pectin Lyase B [Aspergillus niger]
1.21e-67 10 346 4 322
Pectin Lyase A [Aspergillus niger]
1.14e-64 10 346 4 322
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.52e-86 15 346 29 342
Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1
1.43e-83 10 351 25 350
Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1
1.43e-83 10 351 25 350
Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1
8.32e-83 11 386 25 384
Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2
8.32e-83 11 386 25 384
Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000073 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_489646-t26_1-p1.