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CAZyme Information: PHYSODRAFT_488921-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_488921-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_488921-t26_1-p1
CAZy Family GH7
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
296 31603.68 4.7182
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_488921-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 9 256 1.4e-72 0.926530612244898

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
236766 rne 2.89e-04 202 285 916 1000
ribonuclease E; Reviewed
236776 PRK10856 4.08e-04 192 284 150 243
cytoskeleton protein RodZ.
235906 PRK07003 0.001 202 289 460 547
DNA polymerase III subunit gamma/tau.
236766 rne 0.001 185 285 825 938
ribonuclease E; Reviewed
139494 PRK13335 0.005 185 286 52 162
superantigen-like protein SSL3; Reviewed.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.10e-185 1 296 1 296
8.96e-160 1 238 1 239
1.21e-120 1 199 1 202
1.11e-119 1 202 1 205
6.37e-119 1 202 1 205

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.83e-15 123 188 96 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_488921-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000298 0.999690 CS pos: 19-20. Pr: 0.9794

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_488921-t26_1-p1.