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CAZyme Information: PHYSODRAFT_477820-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_477820-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_477820-t26_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
202 JH159151|CGC13 22183.47 4.1128
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_477820-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 17 192 2.4e-49 0.7061224489795919

CDD Domains      help

PHYSODRAFT_477820-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.91e-149 1 202 1 202
7.82e-134 1 202 1 202
4.52e-133 1 202 1 202
1.84e-132 1 202 1 202
3.05e-131 1 202 1 202

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.44e-20 92 184 70 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_477820-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.470827 0.529156 CS pos: 24-25. Pr: 0.3247

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_477820-t26_1-p1.