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CAZyme Information: PHYSODRAFT_475612-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_475612-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_475612-t26_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2025 230530.43 8.1685
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.34:28

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT48 1113 1839 5.3e-280 0.9580514208389715

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396784 Glucan_synthase 0.0 1113 1799 3 714
1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1).
405046 FKS1_dom1 1.28e-27 235 324 8 106
1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 4 2019 5 2018
0.0 1 2025 1 2023
0.0 3 2025 6 2019
1.55e-275 144 2006 92 1761
1.95e-271 144 1827 69 1579

PDB Hits      help

PHYSODRAFT_475612-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.08e-249 141 2008 255 1929
Callose synthase 7 OS=Arabidopsis thaliana OX=3702 GN=CALS7 PE=3 SV=3
3.38e-249 141 2010 232 1947
Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3
1.89e-247 141 2001 239 1917
Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1
6.66e-247 114 2010 186 1947
Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2
6.70e-245 136 2007 245 1888
Callose synthase 9 OS=Arabidopsis thaliana OX=3702 GN=CALS9 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000066 0.000001

TMHMM  Annotations      download full data without filtering help

Start End
366 388
590 612
633 655
681 703
710 732
1540 1562
1582 1604
1614 1636
1673 1695
1749 1771
1826 1843
1856 1878
1898 1917
1922 1939
1958 1980