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CAZyme Information: PHYSODRAFT_474751-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_474751-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_474751-t26_1-p1
CAZy Family GH5
CAZyme Description family 3 glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
775 JH159151|CGC30 84232.48 5.3604
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 120 337 4.8e-56 0.9537037037037037

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
185053 PRK15098 2.54e-116 15 743 19 746
beta-glucosidase BglX.
224389 BglX 4.47e-62 94 458 37 385
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629 PLN03080 5.02e-62 122 718 91 742
Probable beta-xylosidase; Provisional
396478 Glyco_hydro_3_C 6.56e-49 409 638 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
395747 Glyco_hydro_3 7.52e-48 40 370 2 315
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 47 775 1 727
4.56e-289 29 772 66 808
5.04e-282 23 772 22 762
7.46e-261 13 772 58 819
6.70e-258 13 772 13 763

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.46e-127 27 722 13 718
Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
1.83e-85 120 747 73 718
Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
9.52e-85 120 747 73 718
Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
9.72e-85 120 747 74 719
Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
1.83e-84 120 747 105 750
Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.16e-145 29 747 78 811
Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
4.05e-126 27 722 35 740
Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
1.31e-83 31 747 38 750
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
4.68e-80 31 747 38 750
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
5.24e-77 117 747 64 706
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000203 0.999796 CS pos: 21-22. Pr: 0.9675

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_474751-t26_1-p1.