CAZyme Information: PHYSODRAFT_472060-t26_1-p1

Basic Information

• Species: Phytophthora sojae
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
• CAZyme ID: PHYSODRAFT_472060-t26_1-p1
• CAZy Family: GH47
• CAZyme Description: putative hydrolase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
760		82335.24	4.2021

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PsojaeP6497	28142	1094619	1653	26489

• Gene Location: location=JH159151:4966031-4968421(-)

Full Sequence      

MIKNWLLAAALTLLQPALASSSGSSASGSDSLDAQAQTIVDGFSTDLVIGQMCQLDISMV
LNSDHSVNETLVRQYAKLGVGSYLNSPFAGWNATGWRNTIKEIQTYHMDENGGHPMVYGL
DSVHGAQYVDQAVMFPQQINAGASFNPDLARKMGFVTARDTAAAGITWVLGPILDISYNP
LWTRTYETFGEDPYLASVLGAAYIQGVQNNSQNGACMKHFIGYSQTATGVDREGTTISDY
DLLNYHVPSFKAGIEHGAMSTMENYISVNGAPVISSTKILNNLLRDDLGFDGVVVTDWGE
VNNLQSWHRVVRTQQDAVELVVANTSLDMSMVPYSTDFIDQVKSVLSSNADYEDRLRSSA
KRIIKMKLEMGLYDTPVPGEDNVDLVGNNDDLEEALNLARESIVLLKNDDNLLPLANGTS
CGGWSIYWQGTSGNDYFAHGTVDGTYSDEDLSTATGYASDADVVIVAIGEAPYAEKWGDI
DELTLPSGQLEYVQALANTGTEVVLILFEGRPRLLGSLPDSVSAVVWGGLPCEQGGQAMA
EILFGEVNPSGRLPITYPKYSGHIMIPYRHRVDTQCSYSACEMQWDFGAGLSYTNFSYSD
LKLSTNKITSNDDTVTVSVKVTNNGTRAGKETVMLFMIQPYRAISVPEVKMLRKFEKIEL
EAGASTTAMFTLTADDWSVYKPQIGSGLNRVAENGEFVVAIHPDTDCDVYNDAGITNELC
ANFTLAAASATVGDSTSSFASMSEMAWWATLLSCVLGLAL

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	111	323	2.8e-62	0.9398148148148148

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	2.61e-100	115	705	105	754	beta-glucosidase BglX.
224389	BglX	7.24e-63	49	416	7	351	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629	PLN03080	3.30e-53	129	672	108	742	Probable beta-xylosidase; Provisional
395747	Glyco_hydro_3	3.14e-51	44	364	1	314	Glycosyl hydrolase family 3 N terminal domain.
396478	Glyco_hydro_3_C	3.29e-41	403	593	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	5.12e-288	1	725	1	762
CCA27737.1|GH3	2.85e-263	34	725	66	808
UIZ29613.1|GH3	4.03e-259	24	730	62	824
UIZ27116.1|GH3	3.42e-253	52	725	1	724
UIZ29432.1|GH3	1.28e-243	24	730	17	768

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	5.86e-125	49	676	30	718	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
7EAP_A	1.87e-71	49	706	31	746	Chain A, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5YOT_A	1.87e-71	49	706	31	746	Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]
5M6G_A	1.37e-69	44	557	59	587	Crystal structure Glucan 1,4-beta-glucosidase from Saccharopolyspora erythraea [Saccharopolyspora erythraea D]
4ZOA_A	1.81e-69	103	710	72	715	Crystal Structure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOA_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOB_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOB_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOD_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOD_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOE_A Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262],4ZOE_B Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	1.01e-133	49	701	93	811	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	4.34e-124	49	676	52	740	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|T2KMH0|PLH24_FORAG	7.70e-79	116	716	68	721	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
sp|P33363|BGLX_ECOLI	5.92e-75	115	705	105	754	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|Q56078|BGLX_SALTY	3.99e-73	115	705	105	754	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000239	0.999743	CS pos: 19-20. Pr: 0.9823

TMHMM  Annotations     

There is no transmembrane helices in PHYSODRAFT_472060-t26_1-p1.