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CAZyme Information: PHYSODRAFT_466617-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_466617-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_466617-t26_1-p1
CAZy Family GH37
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
339 36116.76 9.2939
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 44 316 5.8e-74 0.9201388888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178051 PLN02432 5.08e-48 31 317 9 275
putative pectinesterase
395871 Pectinesterase 1.61e-47 45 312 10 276
Pectinesterase.
178372 PLN02773 2.52e-43 45 317 15 285
pectinesterase
215117 PLN02176 3.32e-43 32 316 38 315
putative pectinesterase
178113 PLN02497 9.78e-42 32 318 31 311
probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.23e-180 1 339 1 338
1.86e-179 1 339 1 338
5.00e-160 6 339 7 344
2.03e-159 6 339 7 344
2.59e-144 6 338 7 343

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.84e-59 25 338 1 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.60e-59 25 338 1 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.35e-30 35 312 9 283
Pectin methylesterase from Carrot [Daucus carota]
3.43e-28 45 312 13 279
Chain A, Pectinesterase 1 [Solanum lycopersicum]
2.31e-12 71 302 74 366
The structure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.85e-75 11 339 4 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
1.28e-73 11 338 4 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
5.15e-65 27 338 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
5.15e-65 27 338 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
7.26e-65 40 338 37 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000281 0.999651 CS pos: 19-20. Pr: 0.9789

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_466617-t26_1-p1.