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CAZyme Information: PHYSODRAFT_438103-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_438103-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_438103-t26_1-p1
CAZy Family GH30|GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
238 JH159166|CGC1 25364.80 4.2047
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 235 1.3e-63 0.9020408163265307

CDD Domains      help

PHYSODRAFT_438103-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.56e-154 1 238 1 238
1.39e-134 1 199 1 200
1.54e-134 1 199 1 200
1.54e-134 1 199 1 200
6.27e-134 1 199 1 200

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.45e-63 23 193 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_438103-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000279 0.999717 CS pos: 22-23. Pr: 0.9747

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_438103-t26_1-p1.