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CAZyme Information: PHYSODRAFT_428199-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_428199-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_428199-t26_1-p1
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
211 21793.14 4.1440
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_428199-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 18 186 1.9e-21 0.9880239520958084

CDD Domains      help

PHYSODRAFT_428199-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.06e-13 9 193 9 190
3.22e-10 16 193 18 195
8.79e-10 6 193 5 189
1.95e-09 5 193 4 187
6.39e-09 17 195 19 195

PDB Hits      help

PHYSODRAFT_428199-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PHYSODRAFT_428199-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.111074 0.888901 CS pos: 17-18. Pr: 0.8437

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_428199-t26_1-p1.