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CAZyme Information: PHYSODRAFT_426658-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_426658-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_426658-t26_1-p1
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
210 JH159181|CGC1 22776.87 5.2788
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_426658-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 16 206 2e-54 0.7224489795918367

CDD Domains      help

PHYSODRAFT_426658-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.86e-158 1 210 1 210
8.91e-104 1 203 1 204
1.12e-33 14 206 14 201
5.12e-32 14 205 24 216
6.22e-32 17 204 17 199

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.01e-12 106 195 69 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_426658-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000256 0.999713 CS pos: 22-23. Pr: 0.9759

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_426658-t26_1-p1.