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CAZyme Information: PHYSODRAFT_375794-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_375794-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_375794-t26_1-p1
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
125 JH159165|CGC2 13267.88 6.0503
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_375794-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 6 117 1.2e-44 0.44081632653061226

CDD Domains      help

PHYSODRAFT_375794-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.41e-94 1 125 1 125
1.22e-66 1 118 1 116
5.00e-62 1 125 85 208
2.86e-61 1 125 85 208
5.00e-58 1 110 85 192

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.50e-17 7 104 69 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_375794-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999937 0.000110

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_375794-t26_1-p1.