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CAZyme Information: PHYSODRAFT_374025-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_374025-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_374025-t26_1-p1
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
300 31356.31 3.9515
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_374025-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 8 270 5.2e-72 0.9795918367346939

CDD Domains      help

PHYSODRAFT_374025-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.99e-187 1 300 1 300
8.57e-136 2 300 5 301
3.69e-132 5 201 8 204
1.49e-131 5 201 8 204
1.49e-131 5 201 8 204

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.59e-19 20 194 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_374025-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000322 0.999638 CS pos: 19-20. Pr: 0.9791

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_374025-t26_1-p1.