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CAZyme Information: PHYSODRAFT_342507-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_342507-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_342507-t26_1-p1
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
559 63015.04 5.7489
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 29 484 1.1e-107 0.9813519813519813

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 3.64e-113 30 485 5 450
Glycosyl hydrolase family 1.
225343 BglB 6.37e-86 30 490 4 457
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215455 PLN02849 3.61e-71 30 480 30 477
beta-glucosidase
215435 PLN02814 6.65e-71 15 452 13 461
beta-glucosidase
215539 PLN02998 3.02e-59 30 482 31 484
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.62e-214 3 499 4 526
4.04e-201 24 494 7 504
1.28e-171 28 492 21 510
3.00e-115 77 489 5 419
5.32e-76 30 479 37 505

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.41e-72 24 454 5 430
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
7.35e-70 30 481 39 503
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]
1.33e-68 30 485 17 488
Crystal Structure of a Rice Os3BGlu6 Beta-Glucosidase [Oryza sativa Japonica Group],3GNP_A Crystal Structure of a Rice Os3BGlu6 Beta-Glucosidase with Octyl-Beta-D-Thio-Glucoside [Oryza sativa Japonica Group],3GNR_A Crystal Structure of a Rice Os3BGlu6 Beta-Glucosidase with covalently bound 2-deoxy-2-fluoroglucoside to the catalytic nucleophile E396 [Oryza sativa Japonica Group]
1.36e-68 30 485 18 489
Rice Os3BGlu6 Beta-Glucosidase E178Q mutant in a covalent complex with Glc from GA4GE. [Oryza sativa Japonica Group]
1.36e-68 30 485 18 489
Rice Os3BGlu6 E178Q with Covalent Glucosyl Moiety from p-nitrophenyl glucopyranoside. [Oryza sativa Japonica Group]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.45e-77 30 479 37 505
Beta-glucosidase 32 OS=Arabidopsis thaliana OX=3702 GN=BGLU32 PE=2 SV=2
3.85e-75 30 479 37 505
Beta-glucosidase 31 OS=Arabidopsis thaliana OX=3702 GN=BGLU31 PE=2 SV=1
1.82e-69 30 490 31 509
Beta-glucosidase 30 OS=Arabidopsis thaliana OX=3702 GN=BGLU30 PE=2 SV=1
2.45e-68 30 482 25 493
Beta-glucosidase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU25 PE=2 SV=2
1.50e-67 30 485 50 521
Beta-glucosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU6 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000446 0.999537 CS pos: 24-25. Pr: 0.9683

TMHMM  Annotations      download full data without filtering help

Start End
522 544