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CAZyme Information: PHYSODRAFT_342361-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_342361-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_342361-t26_1-p1
CAZy Family GH2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
155 17129.43 9.2560
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 104 5.9e-18 0.37551020408163266

CDD Domains      help

PHYSODRAFT_342361-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.18e-117 1 155 1 155
4.53e-96 1 155 1 194
1.49e-74 9 155 10 196
8.33e-69 9 151 10 192
7.61e-60 1 154 1 193

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.75e-26 24 153 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_342361-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000419 0.999534 CS pos: 23-24. Pr: 0.9733

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_342361-t26_1-p1.