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CAZyme Information: PHYSODRAFT_341599-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_341599-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_341599-t26_1-p1
CAZy Family GH1|GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
185 21044.55 5.2854
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_341599-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 3 180 4.5e-57 0.7306122448979592

CDD Domains      help

PHYSODRAFT_341599-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.16e-145 1 185 1 185
6.88e-136 6 185 18 197
2.19e-128 1 179 1 179
6.07e-128 1 184 18 208
1.27e-127 1 185 18 209

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.65e-30 11 173 1 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_341599-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.768157 0.231860

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_341599-t26_1-p1.