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CAZyme Information: PHYSODRAFT_340333-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_340333-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_340333-t26_1-p1
CAZy Family GH17|CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
284 29783.36 4.2962
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 265 1.9e-66 0.9387755102040817

CDD Domains      help

PHYSODRAFT_340333-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.13e-174 1 284 1 284
2.69e-152 1 284 1 295
9.78e-148 1 283 1 274
1.39e-147 1 283 1 274
5.64e-147 1 283 1 274

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.27e-66 24 194 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_340333-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000271 0.999716 CS pos: 23-24. Pr: 0.9770

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_340333-t26_1-p1.