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CAZyme Information: PHYSODRAFT_339832-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_339832-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_339832-t26_1-p1
CAZy Family GH17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
254 JH159161|CGC2 27849.25 4.0911
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_339832-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 126 246 2e-31 0.46122448979591835
AA17 11 116 4.9e-23 0.5387755102040817

CDD Domains      help

PHYSODRAFT_339832-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.86e-62 1 200 1 178
2.86e-62 1 200 1 178
1.15e-61 1 200 1 178
1.15e-61 1 200 1 178
6.48e-61 1 200 1 178

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.95e-09 23 202 1 160
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_339832-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000207 0.999764 CS pos: 22-23. Pr: 0.9783

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_339832-t26_1-p1.