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CAZyme Information: PHYSODRAFT_337507-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_337507-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_337507-t26_1-p1
CAZy Family GH17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
295 JH159158|CGC10 32220.12 4.8964
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 32 198 1.6e-36 0.5243055555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 9.82e-37 98 285 73 290
Pectinesterase.
178051 PLN02432 2.99e-36 36 270 35 272
putative pectinesterase
177947 PLN02313 3.47e-32 29 286 291 566
Pectinesterase/pectinesterase inhibitor
215130 PLN02217 4.44e-32 41 293 276 553
probable pectinesterase/pectinesterase inhibitor
215383 PLN02713 7.40e-32 32 268 269 529
Probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.32e-129 16 295 23 344
2.15e-128 16 295 23 344
2.67e-120 11 295 16 338
2.48e-118 4 295 14 348
9.69e-118 4 295 14 347

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.49e-46 21 294 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
4.92e-46 21 294 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.69e-26 49 268 44 283
Pectin methylesterase from Carrot [Daucus carota]
9.47e-25 29 268 19 279
Chain A, Pectinesterase 1 [Solanum lycopersicum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.50e-55 20 294 18 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.26e-54 38 295 51 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
5.16e-48 8 294 14 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
5.16e-48 8 294 14 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
1.44e-47 44 294 63 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000046 0.000020

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_337507-t26_1-p1.