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CAZyme Information: PHYSODRAFT_329950-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora sojae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae | |||||||||||
| CAZyme ID | PHYSODRAFT_329950-t26_1-p1 | |||||||||||
| CAZy Family | GH12 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 130 | 320 | 3.4e-80 | 0.983957219251337 |
| PL1 | 606 | 796 | 3.4e-80 | 0.983957219251337 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 6.28e-38 | 605 | 795 | 1 | 186 | Amb_all domain. |
| 214765 | Amb_all | 6.28e-38 | 129 | 319 | 1 | 186 | Amb_all domain. |
| 226384 | PelB | 6.16e-14 | 611 | 801 | 92 | 279 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 226384 | PelB | 6.81e-14 | 135 | 319 | 92 | 273 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 5.50e-12 | 123 | 319 | 13 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.53e-252 | 1 | 539 | 1 | 534 | |
| 2.34e-172 | 24 | 412 | 190 | 569 | |
| 3.59e-162 | 5 | 349 | 11 | 346 | |
| 3.41e-143 | 26 | 301 | 21 | 296 | |
| 1.02e-130 | 26 | 404 | 23 | 398 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.10e-80 | 504 | 840 | 5 | 324 | Pectin Lyase B [Aspergillus niger] |
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| 1.09e-79 | 504 | 836 | 5 | 319 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 1.50e-78 | 504 | 836 | 5 | 319 | Pectin Lyase A [Aspergillus niger] |
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| 5.63e-08 | 115 | 404 | 50 | 355 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.48e-94 | 504 | 839 | 25 | 342 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
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| 3.85e-94 | 18 | 415 | 15 | 393 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
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| 3.85e-94 | 18 | 415 | 15 | 393 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 6.67e-90 | 504 | 867 | 23 | 366 | Probable pectin lyase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=pelA PE=3 SV=1 |
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| 2.65e-88 | 504 | 836 | 24 | 339 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000346 | 0.999604 | CS pos: 22-23. Pr: 0.9758 |