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CAZyme Information: PHYSODRAFT_329293-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_329293-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_329293-t26_1-p1
CAZy Family GH12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
310 33090.36 4.3918
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_329293-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 9 267 7.1e-69 0.9714285714285714

CDD Domains      help

PHYSODRAFT_329293-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.81e-169 1 239 1 239
4.00e-161 1 239 1 238
2.05e-120 1 199 1 202
1.88e-119 1 202 1 205
1.08e-118 1 202 1 205

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.88e-15 123 188 96 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_329293-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000298 0.999690 CS pos: 19-20. Pr: 0.9794

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_329293-t26_1-p1.