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CAZyme Information: PHYSODRAFT_324755-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_324755-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_324755-t26_1-p1
CAZy Family GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
262 27264.26 3.9534
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:4 1.14.99.-:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 124 228 3.3e-24 0.39591836734693875
AA17 11 104 4.1e-16 0.35918367346938773

CDD Domains      help

PHYSODRAFT_324755-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.91e-88 1 175 1 203
5.78e-87 1 175 1 203
5.78e-87 1 175 1 203
4.67e-86 1 175 1 203
1.80e-79 1 175 1 204

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.87e-38 24 169 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_324755-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.071395 0.928596 CS pos: 23-24. Pr: 0.7040

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_324755-t26_1-p1.