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CAZyme Information: PHYSODRAFT_324715-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_324715-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_324715-t26_1-p1
CAZy Family GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
274 28924.03 6.2152
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 25 257 6.7e-46 0.9510204081632653

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
411470 opacity_OapA 3.07e-04 191 265 189 262
opacity-associated protein OapA. This family consists of full-length homologs to OapA, opacity-associated protein A as described in Haemophilus influenzae. OapA shares a C-terminal homology domain, called the OapA domain, with the Escherichia coli protein YtfB, which is now known to bind peptidoglycan through its OapA domain and to act as a cell division protein.
237019 PRK11907 0.001 186 262 8 82
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase.
236776 PRK10856 0.003 195 263 151 220
cytoskeleton protein RodZ.
237030 kgd 0.009 182 264 30 107
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.04e-76 13 266 3 246
2.23e-74 13 266 3 250
5.48e-72 13 220 3 205
2.11e-55 19 200 6 203
2.81e-55 19 206 6 209

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.30e-44 71 193 55 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_324715-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.032361 0.967624 CS pos: 29-30. Pr: 0.7594

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_324715-t26_1-p1.