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CAZyme Information: PHYSODRAFT_322946-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora sojae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae | |||||||||||
| CAZyme ID | PHYSODRAFT_322946-t26_1-p1 | |||||||||||
| CAZy Family | GH1 | |||||||||||
| CAZyme Description | polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 127 | 442 | 4.2e-60 | 0.9569230769230769 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 3.91e-63 | 129 | 442 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 3.39e-28 | 181 | 442 | 141 | 386 | polygalacturonase |
| 215426 | PLN02793 | 5.15e-23 | 179 | 402 | 143 | 368 | Probable polygalacturonase |
| 177865 | PLN02218 | 3.06e-20 | 179 | 411 | 156 | 391 | polygalacturonase ADPG |
| 178580 | PLN03003 | 3.15e-20 | 181 | 408 | 115 | 337 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.90e-263 | 1 | 442 | 1 | 452 | |
| 4.12e-263 | 1 | 442 | 1 | 452 | |
| 9.67e-262 | 1 | 442 | 1 | 452 | |
| 2.78e-231 | 1 | 442 | 1 | 434 | |
| 2.16e-216 | 98 | 442 | 22 | 366 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.81e-60 | 111 | 442 | 8 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.72e-59 | 111 | 442 | 8 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.20e-59 | 114 | 442 | 3 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 8.99e-59 | 128 | 442 | 21 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 5.58e-55 | 114 | 442 | 3 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.36e-61 | 128 | 442 | 60 | 378 | Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1 |
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| 1.48e-60 | 128 | 442 | 60 | 378 | Endopolygalacturonase E OS=Aspergillus niger OX=5061 GN=pgaE PE=1 SV=1 |
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| 1.68e-59 | 128 | 442 | 63 | 380 | Endo-polygalacturonase OS=Sclerotinia sclerotiorum OX=5180 GN=PG1 PE=3 SV=1 |
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| 7.79e-59 | 106 | 438 | 19 | 355 | Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PGU1 PE=1 SV=1 |
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| 1.32e-58 | 114 | 442 | 35 | 368 | Probable endopolygalacturonase I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaI PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000185 | 0.999787 | CS pos: 22-23. Pr: 0.9725 |