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CAZyme Information: PHYSODRAFT_320492-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_320492-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_320492-t26_1-p1
CAZy Family GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
479 52764.35 4.3717
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.10.3.2:77

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA1 58 442 1.4e-50 0.9413407821229051

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
274555 ascorbase 1.50e-44 26 448 1 524
L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases.
177843 PLN02191 1.70e-36 6 458 9 556
L-ascorbate oxidase
215324 PLN02604 1.76e-33 60 448 57 547
oxidoreductase
225043 SufI 4.62e-33 14 450 21 451
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis].
259868 CuRO_2_LCC_like 1.22e-28 127 273 2 152
Cupredoxin domain 2 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins. Laccase-like multicopper oxidases (MCOs) are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.00e-179 21 468 20 544
2.27e-164 22 468 12 536
4.27e-139 13 473 5 566
1.29e-138 15 468 6 565
1.86e-53 25 456 39 544

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.41e-45 59 457 35 475
Crystal Structure of Laccase from Cerrena sp. RSD1 [Cerrena],5Z1X_B Crystal Structure of Laccase from Cerrena sp. RSD1 [Cerrena],5Z22_A Crystal Structure of Laccase from Cerrena sp. RSD1 [Cerrena]
1.33e-42 30 457 28 498
Crystal structure of laccases from Pycnoporus sanguineus, izoform II [Trametes coccinea],5NQ9_A Crystal structure of laccases from Pycnoporus sanguineus, izoform II, monoclinic [Trametes sanguinea],5NQ9_C Crystal structure of laccases from Pycnoporus sanguineus, izoform II, monoclinic [Trametes sanguinea]
1.37e-42 41 457 18 479
Chain A, LACCASE 2 [Trametes versicolor]
1.26e-41 30 457 7 477
CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS [Trametes cinnabarina]
9.53e-41 69 450 45 471
Chain A, LACCASE 1 [Coprinopsis cinerea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.88e-43 65 457 62 500
Laccase OS=Phlebia radiata OX=5308 GN=LAC PE=1 SV=2
5.68e-42 65 457 64 507
Laccase-5 OS=Trametes versicolor OX=5325 GN=LCC5 PE=2 SV=1
7.83e-42 65 457 64 507
Laccase-5 OS=Trametes villosa OX=47662 GN=LCC5 PE=3 SV=2
9.59e-42 41 457 38 499
Laccase-2 OS=Trametes versicolor OX=5325 GN=LCC2 PE=1 SV=1
2.51e-41 41 457 38 499
Laccase-2 OS=Trametes villosa OX=47662 GN=LCC2 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000188 0.999789 CS pos: 24-25. Pr: 0.4552

TMHMM  Annotations      download full data without filtering help

Start End
7 29