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CAZyme Information: PHYSODRAFT_318683-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_318683-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_318683-t26_1-p1
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
352 JH159160|CGC3 36588.91 3.5201
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_318683-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 7 246 7.5e-77 0.926530612244898

CDD Domains      help

PHYSODRAFT_318683-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.19e-185 1 352 1 352
1.38e-127 4 351 9 346
1.96e-127 8 351 14 346
2.77e-127 8 351 14 346
7.90e-127 8 351 14 346

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.33e-12 94 191 69 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_318683-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000312 0.999663 CS pos: 18-19. Pr: 0.9793

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_318683-t26_1-p1.