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CAZyme Information: PHYSODRAFT_318648-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_318648-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_318648-t26_1-p1
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
278 JH159160|CGC5 29226.81 5.1494
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_318648-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 23 190 8.9e-23 0.9880239520958084

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397269 LPMO_10 2.41e-08 93 191 87 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.
225932 COG3397 1.07e-04 20 197 27 211
Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.29e-17 8 212 5 207
2.72e-16 7 196 5 195
7.07e-16 10 196 8 195
9.56e-16 20 201 14 193
4.91e-15 20 196 15 191

PDB Hits      help

PHYSODRAFT_318648-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PHYSODRAFT_318648-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.679388 0.320606

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_318648-t26_1-p1.