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CAZyme Information: PHYSODRAFT_309223-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_309223-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_309223-t26_1-p1
CAZy Family CE5
CAZyme Description family 3 glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
701 76355.92 6.8552
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37:92 3.2.1.55:39 3.2.1.21:1 3.2.1.6:1 3.2.1.73:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 112 275 1.5e-44 0.6574074074074074

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 2.76e-131 1 586 8 639
Probable beta-xylosidase; Provisional
185053 PRK15098 9.44e-96 113 676 163 750
beta-glucosidase BglX.
396478 Glyco_hydro_3_C 1.69e-55 350 580 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
224389 BglX 4.37e-44 113 375 126 364
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747 Glyco_hydro_3 7.15e-23 113 310 131 316
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.10e-267 108 697 35 637
2.99e-246 23 686 25 739
7.81e-116 27 676 29 739
1.20e-111 24 584 37 633
1.88e-111 28 682 7 693

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.64e-106 35 674 16 715
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
4.12e-105 35 674 16 715
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
1.79e-91 18 697 26 758
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]
1.31e-87 28 697 33 760
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
1.34e-87 28 697 33 760
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.29e-111 34 584 59 646
Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1
1.49e-110 22 697 30 761
Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=bxlB PE=3 SV=1
1.49e-110 22 697 30 761
Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=bxlB PE=3 SV=1
1.22e-109 34 664 54 751
Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1
2.90e-109 32 590 42 636
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000224 0.999739 CS pos: 19-20. Pr: 0.8262

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_309223-t26_1-p1.