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CAZyme Information: PHYSODRAFT_259951-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora sojae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae | |||||||||||
| CAZyme ID | PHYSODRAFT_259951-t26_1-p1 | |||||||||||
| CAZy Family | AA17 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 113 | 275 | 2.7e-39 | 0.4523076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.08e-46 | 49 | 272 | 1 | 273 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 1.47e-18 | 115 | 268 | 212 | 360 | Probable polygalacturonase |
| 177865 | PLN02218 | 1.49e-17 | 132 | 247 | 241 | 355 | polygalacturonase ADPG |
| 227721 | Pgu1 | 1.72e-14 | 110 | 243 | 268 | 404 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215540 | PLN03010 | 2.45e-14 | 99 | 282 | 166 | 352 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.40e-148 | 1 | 272 | 1 | 318 | |
| 4.52e-135 | 1 | 272 | 1 | 317 | |
| 1.05e-133 | 13 | 272 | 12 | 317 | |
| 8.69e-128 | 23 | 272 | 1 | 296 | |
| 1.62e-125 | 1 | 272 | 1 | 336 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.81e-45 | 34 | 272 | 11 | 296 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.81e-45 | 34 | 272 | 11 | 296 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.27e-45 | 34 | 270 | 3 | 286 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.09e-42 | 34 | 272 | 3 | 288 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
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| 4.99e-40 | 38 | 272 | 11 | 291 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.28e-52 | 8 | 272 | 8 | 319 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
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| 1.28e-52 | 8 | 272 | 8 | 319 | Endopolygalacturonase B OS=Aspergillus flavus (strain ATCC MYA-384 / AF70) OX=1392242 GN=pgaB PE=2 SV=2 |
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| 1.28e-52 | 8 | 272 | 8 | 319 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
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| 1.31e-48 | 8 | 272 | 9 | 320 | Probable endopolygalacturonase I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaI PE=3 SV=1 |
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| 4.82e-47 | 15 | 268 | 15 | 308 | Probable endopolygalacturonase B OS=Aspergillus kawachii OX=1069201 GN=pgaB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000212 | 0.999774 | CS pos: 25-26. Pr: 0.7622 |