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CAZyme Information: PHYSODRAFT_257622-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_257622-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_257622-t26_1-p1
CAZy Family AA17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
349 37083.92 9.9486
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 36 312 7.2e-71 0.9270833333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 7.24e-47 35 312 2 276
Pectinesterase.
178051 PLN02432 1.35e-45 35 315 13 273
putative pectinesterase
178113 PLN02497 3.02e-40 35 315 34 307
probable pectinesterase
178372 PLN02773 1.09e-38 44 314 14 282
pectinesterase
215173 PLN02304 1.12e-38 30 315 67 355
probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.03e-169 1 325 1 324
1.22e-161 1 325 1 324
6.43e-149 6 327 7 332
9.13e-149 6 327 7 332
1.71e-135 6 327 7 332

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.45e-54 27 325 3 288
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.04e-54 27 325 3 288
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.30e-31 35 312 9 283
Pectin methylesterase from Carrot [Daucus carota]
2.74e-25 45 312 13 279
Chain A, Pectinesterase 1 [Solanum lycopersicum]
9.16e-13 36 306 7 315
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.76e-70 13 327 6 320
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
3.52e-70 27 327 20 321
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
7.55e-61 11 325 13 313
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
7.55e-61 11 325 13 313
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
4.20e-60 1 326 1 314
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000258 0.999734 CS pos: 19-20. Pr: 0.9804

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_257622-t26_1-p1.