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CAZyme Information: PHYSODRAFT_254068-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_254068-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_254068-t26_1-p1
CAZy Family AA17
CAZyme Description glycosyl hydrolase family 17-like protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
299 32951.97 6.7438
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_254068-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH17 26 284 1.1e-19 0.9871382636655949

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227625 Scw11 5.48e-23 40 277 63 304
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
366033 Glyco_hydro_17 2.02e-04 200 284 219 307
Glycosyl hydrolases family 17.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.19e-155 7 285 10 288
5.70e-94 18 281 566 829
1.40e-82 10 288 13 291
1.36e-58 10 198 13 202
1.09e-47 26 290 22 287

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.20e-09 21 281 34 289
Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.32e-12 91 261 105 287
Probable glucan endo-1,3-beta-glucosidase eglC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=eglC PE=1 SV=1
2.51e-06 26 228 138 342
Probable family 17 glucosidase SCW10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SCW10 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000259 0.999718 CS pos: 20-21. Pr: 0.8444

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_254068-t26_1-p1.