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CAZyme Information: PHYSODRAFT_250943-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_250943-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_250943-t26_1-p1
CAZy Family AA17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2034 JH159155|CGC6 220857.02 4.3984
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_250943-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 750 902 1e-20 0.776595744680851
CBM13 916 1064 3.7e-17 0.7553191489361702
CBM13 1079 1225 1.5e-16 0.7446808510638298
CBM13 1420 1548 6.8e-16 0.648936170212766

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395527 Ricin_B_lectin 2.92e-17 1244 1372 4 126
Ricin-type beta-trefoil lectin domain.
395527 Ricin_B_lectin 7.26e-17 1423 1545 11 126
Ricin-type beta-trefoil lectin domain.
395527 Ricin_B_lectin 2.56e-16 755 878 10 126
Ricin-type beta-trefoil lectin domain.
238092 RICIN 1.83e-14 1414 1546 1 123
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
238092 RICIN 2.04e-14 1243 1374 3 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits      help

PHYSODRAFT_250943-t26_1-p1 has no CAZyme hit.

PDB Hits      help

PHYSODRAFT_250943-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PHYSODRAFT_250943-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999655 0.000345

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_250943-t26_1-p1.