logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHYSODRAFT_247721-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_247721-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_247721-t26_1-p1
CAZy Family AA17
CAZyme Description family 3 glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
805 88678.62 5.3555
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37:92 3.2.1.55:39 3.2.1.21:1 3.2.1.6:1 3.2.1.73:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 73 320 4.2e-60 0.9722222222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 3.02e-134 14 738 20 774
Probable beta-xylosidase; Provisional
185053 PRK15098 8.23e-85 101 732 118 750
beta-glucosidase BglX.
224389 BglX 2.61e-60 100 419 80 365
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
396478 Glyco_hydro_3_C 8.65e-47 393 623 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
395747 Glyco_hydro_3 9.48e-39 83 353 70 316
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 121 804 1 684
1.51e-317 11 742 18 739
1.11e-139 26 749 26 752
3.28e-139 33 732 3 690
2.78e-134 32 738 8 693

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.56e-124 37 730 16 715
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
1.39e-123 37 730 16 715
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
3.93e-102 20 760 23 767
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
2.04e-101 20 759 23 766
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
2.25e-101 20 759 27 764
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.59e-136 13 757 19 756
Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=bxlB PE=3 SV=1
6.20e-135 26 757 32 765
Probable exo-1,4-beta-xylosidase xlnD OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xlnD PE=3 SV=1
3.68e-133 26 757 32 765
Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=bxlB PE=3 SV=1
3.68e-133 26 757 32 765
Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=bxlB PE=3 SV=1
1.17e-132 15 757 19 761
Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=bxlB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000220 0.999726 CS pos: 19-20. Pr: 0.9769

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_247721-t26_1-p1.