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CAZyme Information: PHYSODRAFT_246481-t26_1-p1

You are here: Home > Sequence: PHYSODRAFT_246481-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora sojae
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora sojae
CAZyme ID PHYSODRAFT_246481-t26_1-p1
CAZy Family AA1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
318 JH159160|CGC4 32792.23 3.9905
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PsojaeP6497 28142 1094619 1653 26489
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYSODRAFT_246481-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 280 1.3e-70 0.9387755102040817

CDD Domains      help

PHYSODRAFT_246481-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.96e-161 1 318 1 318
2.33e-135 1 214 1 214
1.77e-134 1 214 1 214
4.13e-133 1 214 1 214
3.92e-130 1 214 1 214

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.39e-13 24 196 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYSODRAFT_246481-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000434 0.999528 CS pos: 23-24. Pr: 0.9705

TMHMM  Annotations      help

There is no transmembrane helices in PHYSODRAFT_246481-t26_1-p1.