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CAZyme Information: PHYCI_99302T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_99302T0-p1 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 1.1.99.18:3 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 19 | 553 | 5.4e-116 | 0.9726277372262774 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 2.98e-37 | 23 | 555 | 8 | 537 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 235000 | PRK02106 | 9.52e-17 | 23 | 300 | 6 | 281 | choline dehydrogenase; Validated |
| 215420 | PLN02785 | 1.25e-16 | 10 | 298 | 42 | 307 | Protein HOTHEAD |
| 366272 | GMC_oxred_N | 2.34e-14 | 110 | 293 | 24 | 204 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 223717 | FixC | 8.49e-07 | 23 | 90 | 4 | 69 | Dehydrogenase (flavoprotein) [Energy production and conversion]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.58e-164 | 8 | 549 | 8 | 546 | |
| 2.29e-156 | 13 | 554 | 15 | 550 | |
| 1.03e-147 | 20 | 533 | 19 | 526 | |
| 1.14e-145 | 10 | 551 | 11 | 547 | |
| 1.73e-144 | 20 | 557 | 21 | 555 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.22e-51 | 23 | 557 | 3 | 540 | Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 5.70e-51 | 23 | 557 | 8 | 545 | Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 4.79e-42 | 22 | 552 | 7 | 543 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 2.75e-41 | 22 | 552 | 229 | 765 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 3.57e-37 | 22 | 552 | 229 | 764 | Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.02e-49 | 10 | 557 | 221 | 772 | Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1 |
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| 8.48e-19 | 20 | 548 | 4 | 530 | 4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1 |
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| 2.25e-17 | 18 | 440 | 29 | 458 | Dehydrogenase eriK OS=Hericium erinaceus OX=91752 GN=eriK PE=3 SV=1 |
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| 3.53e-15 | 23 | 365 | 41 | 380 | Pyranose dehydrogenase OS=Agaricus xanthodermus OX=83518 GN=pdh1 PE=1 SV=1 |
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| 4.67e-15 | 23 | 335 | 41 | 353 | Pyranose dehydrogenase 2 OS=Leucoagaricus meleagris OX=201219 GN=pdh2 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000331 | 0.999646 | CS pos: 19-20. Pr: 0.9740 |