logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHYCI_99179T0-p1

You are here: Home > Sequence: PHYCI_99179T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_99179T0-p1
CAZy Family PL1
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
489 54634.87 7.0216
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_99179T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT60 69 380 2e-59 0.9939393939393939

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371506 GlcNAc 3.00e-43 69 380 2 350
Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 489 1 489
1.17e-251 20 480 1 460
8.53e-200 7 481 10 490
5.75e-146 27 481 30 511
3.89e-39 56 397 46 385

PDB Hits      help

PHYCI_99179T0-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.29e-20 65 310 2 247
[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase OS=Dictyostelium discoideum OX=44689 GN=gnt1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000201 0.999788 CS pos: 21-22. Pr: 0.9788

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_99179T0-p1.