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CAZyme Information: PHYCI_98358T0-p1

You are here: Home > Sequence: PHYCI_98358T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_98358T0-p1
CAZy Family GT8
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
591 PcinCBS144-22_SC0220|CGC1 66113.94 4.9253
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 29 503 6.4e-133 0.986013986013986

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 3.14e-143 31 504 5 451
Glycosyl hydrolase family 1.
225343 BglB 7.37e-116 31 507 4 456
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 1.04e-93 6 516 8 494
beta-glucosidase
215455 PLN02849 1.03e-89 22 498 13 477
beta-glucosidase
215539 PLN02998 1.94e-77 31 498 31 482
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.53e-255 79 591 5 503
3.42e-214 23 506 24 515
2.26e-211 25 517 7 507
4.02e-202 25 507 17 507
6.39e-100 31 503 3 454

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.01e-92 13 497 25 501
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]
1.64e-89 31 507 13 466
Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_B Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_C Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8]
4.03e-87 31 497 20 475
Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGL_B Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGM_A Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGM_B Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],7BZM_A Crystal structure of rice Os3BGlu7 with glucoimidazole [Oryza sativa Japonica Group],7BZM_B Crystal structure of rice Os3BGlu7 with glucoimidazole [Oryza sativa Japonica Group]
5.66e-87 31 497 20 475
Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose [Oryza sativa Japonica Group],4QLL_B Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose [Oryza sativa Japonica Group]
7.38e-87 29 504 36 500
Structural analysis and insights into glycon specificity of the rice GH1 Os7BGlu26 beta-D-mannosidase [Oryza sativa Indica Group],4JIE_A Structural analysis and insights into glycon specificity of the rice GH1 Os7BGlu26 beta-D-mannosidase [Oryza sativa Indica Group]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.42e-91 31 504 25 497
Beta-glucosidase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU25 PE=2 SV=2
1.28e-89 31 499 37 507
Beta-glucosidase 32 OS=Arabidopsis thaliana OX=3702 GN=BGLU32 PE=2 SV=2
2.97e-89 31 497 19 485
Beta-glucosidase 27 OS=Arabidopsis thaliana OX=3702 GN=BGLU27 PE=2 SV=2
3.03e-88 31 515 31 516
Beta-glucosidase 30 OS=Arabidopsis thaliana OX=3702 GN=BGLU30 PE=2 SV=1
5.76e-88 31 498 29 494
Beta-glucosidase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU27 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000231 0.999753 CS pos: 28-29. Pr: 0.8595

TMHMM  Annotations      download full data without filtering help

Start End
7 26
541 563